Commit 98f0db13 authored by Josh's avatar Josh
Browse files

install python3-setuptools for Daniel's packages

parent 4a7d7efc
...@@ -318,7 +318,10 @@ RUN Rscript -e "install.packages(pkg='phangorn',repos='http://archive.linux.duke ...@@ -318,7 +318,10 @@ RUN Rscript -e "install.packages(pkg='phangorn',repos='http://archive.linux.duke
Rscript -e "devtools::install_github('reptalex/phylofactor',version='3.10')" Rscript -e "devtools::install_github('reptalex/phylofactor',version='3.10')"
#SEPP for greengenes #SEPP for greengenes
RUN cd /opt && \ RUN apt-get update && \
apt-get install -yq --no-install-recommends \
python3-setuptools && \
cd /opt && \
wget --no-verbose https://raw.github.com/smirarab/sepp-refs/master/gg/sepp-package.tar.bz && \ wget --no-verbose https://raw.github.com/smirarab/sepp-refs/master/gg/sepp-package.tar.bz && \
tar -xjf sepp-package.tar.bz && \ tar -xjf sepp-package.tar.bz && \
cd /opt/sepp-package/sepp && \ cd /opt/sepp-package/sepp && \
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