Commit 8e03d304 authored by josh's avatar josh
Browse files

Install cutadapt

parent 40cbb362
Pipeline #194147 passed with stages
in 1 minute and 3 seconds
......@@ -363,7 +363,8 @@ RUN pip3 install --no-cache-dir MetaPhlAn
RUN apt-get update && \
apt-get install -yq --no-install-recommends \
kraken2 \
bowtie2
bowtie2 \
cutadapt
# kaiju
RUN mkdir kaiju && \
......
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